|
Adam Mouton
A thesis
submitted in partial fulfillment of the
requirements for the degree of
Master of Science
University of Washington
2005
Program Authorized to Offer Degree:
College of Forest Resources
ACKNOWLEDGEMENTS
I am grateful to Peter Schiess for giving me the opportunity
to take on this project and work through it as desired and Finn
Krogstad for his ability to handle a bombardment of questions.
Thank you to David Montgomery and Steven Burges for advising
me on the ways of hydrology and then some; Luke Rogers and Phil
Hurvitz for early GIS advice; Hans-Erik Andersen for LiDAR pre-processing;
Bob McGaughey for various advice; David Tarboton and Theodore
Endreny for question regarding resolution and modeling; and Julie
Forcier for grammatical help. Capstone 2005 which is composed
of Adam Baines, Lou Beck, Ben Carlson, Mark Williams, Sara Wilson,
Edwin Wong, and Amy Hawk for there assistance during field collection.
The Washington State DNR provided the financial support for this
study.

ABSTRACT
The effects of digital elevation model (DEM) grid
size for stream network predictions in the northwestern United
States were examined to test the accuracy of high-resolution
LiDAR (Light Detection And Ranging) digital elevation data. LiDAR
elevation data were gridded at 2-, 6-, and 10-m scales and flow
paths were predicted by four common routing algorithms known
as D8, D-Infinity, Multiple Flow, and DEMON, D8 being the least
sophisticated. These routing algorithms were also applied to
a 10-m USGS DEM to compare LiDAR with the previously used data
for hydrologic modeling. The analyses indicated that as topographic
detail increased, all LiDAR-derived models delineated more streams
and located streams in their topographically correct position
when compared to a 10-m USGS DEM. Stream maps generated by either
D8 or DEMON converged as the DEM resolution was increased. The
data suggests that increased DEM resolution decreases the need
for sophisticated models, reducing processing times required
to create accurate stream locations and attributes.
LiDAR digital elevation data also improved the modeling of perennial
stream heads and fish habitat potential in a direct comparison
to a 10-m USGS DEM. Distances between stream heads predicted
using a LiDAR dataset and field verified stream heads were significantly
less than those predicted using a USGS dataset. This illustrates
the potential use of LiDAR to accurately predict perennial flow
in a given landscape. The ability to locate fish barriers based
on landscape gradient also improved with LiDAR data. A USGS dataset
used to find fish barriers occasionally found barriers in places
where none existed or vice versa. As LiDAR datasets become more
available, automated creation of stream networks and their hydrologic
features will become more feasible and the accuracy of the results
will be much improved.
TABLE OF CONTENTS

LIST OF FIGURES
| Figure 1: |
Definitions of concentrated and dispersed
contributing area and specific catchment area |
| Figure 2: |
Hydro Layer Discrepancies |
| Figure 3: |
10 Meter USGS Contours overlaid onto a LiDAR
DEM |
| Figure 4: |
Stream layer produced from flow accumulation
in GIS |
| Figure 5: |
Study Site |
| Figure 6: |
Points centered around the Stream head which
indicates the status of perennial flow |
| Figure 7: |
Schematic of the DEM pixel aspect computation
and flow angle mapping performed by the D8, MFD, Dinf, and
DEMON algorithms |
| Figure 8: |
Plot of catchment area for 2-m LiDAR DEM at Tahoma
State Forest |
| Figure 9: |
Plot of catchment area for 10-m USGS DEM at Tahoma
State Forest |
| Figure 10: |
USGS and LiDAR Generated 10-m, D8 Comparison |
| Figure 11: |
2-m DEM without using culvert correction |
| Figure 12: |
2-m DEM using culvert correct. Stream culverts
are circle, Ditch culvert are triangle |
| Figure 13: |
6-m DEM stream channel determination |
| Figure 14: |
LiDAR vs. DNR perennial streams |
| Figure 15: |
Stream head defined by the landscape |
| Figure 16: |
Spring identified as a stream head in the field |
| Figure 17: |
Stream heads within the study site |
| Figure 18: |
The change in distance field verified stream
heads have from the modeled stream heads at a given resolution |
| Figure 19: |
Field Stream Head distance from various flow
direction modeled stream |
| Figure 20: |
Longitudinal Profile of a selected creek |
| Figure 21: |
Stream Channel with predicted fish habitat |
LIST OF TABLES
| Table 1: |
Area Covered by Buffers |
| Table 2: |
Summary of the final logistic regression model
coefficients, standard errors, significance of the coefficients,
and 95% confidence intervals for the exponential of the
coefficients |
| Table 3: |
Stream parameters identified and collected in
the field |
| Table 4: |
Values associated with each stream feature type |
| Table 5: |
Relation between D8 and DEMON algorithms at
various resolutions |
| Table 6: |
DNR Hydro Layer Potential Error |
| Table 7: |
Sub-Basins used in perennial head identification |
| Table 8: |
Summary of the final logistic regression model |
| Table 9: |
Predicted Fish-Bearing Streams within the Study
Site using different techniques. |

1. INTRODUCTION
1.1 Overview
Streams are one of the most valuable public resources in the
State of Washington. They provide the habitat for fish, an
important cultural as well ecological asset. Fish bearing
streams and the related habitat also are typically found
within forests, important for various aspects, such as stream
quality and economic values. Ironically, there is a lack
of accurate data in order to properly delineate streams.
Long-term sustainable harvest volume calculations, feasible
harvest settings and road location design at the landscape
or watershed level are critically dependent on reliable stream
data. In a small project near Forks (Schiess and Tryall,
2002), stream buffer areas based on official DNR data (Hydro
layer) underestimated actual stream area by an average factor
of two.
However, new mapping technology provides the potential of
developing improved stream data from more detailed surface
topology. LiDAR (Light Detection And Ranging) data which creates
sub meter topography maps (Appendix A) is one technology that
promises to provide increased resolution in digital surface
detail compared with the typical 10 meter topographic maps
and could lead to more precise and accurate maps of stream
networks. Preliminary analyses showed that using LiDAR data
located more actual stream channels and placed streams in their
topographically correct position (Schiess and Tryall, 2002).
This ability to generate accurate stream locations and physical
attributes using LiDAR will allow long-term sustainable harvest
volume calculations to be more reliable.
In order to properly map the physical extent of channels in
a watershed, the difference between processes on hillslopes
and in channels must be determined (Tarboton 2003). This difference
becomes apparent when calculating how water collects on a landscape
in a given dataset with flow direction of the water known.
In channels flow is concentrated. The drainage area,
A, (in m2) contributing to each point in a
channel may be quantified.
On hillslopes flow is dispersed. The "area" draining
to a point is zero because the width of a flow path to
a point disappears. On hillslopes flow and drainage area
need
to be characterized per unit width (m3/s/m = m3/s
for flow). The specific catchment area, a, is defined as
the upslope
drainage area per unit contour width, b, (a = A/b) (Moore
1991) and has units of length (m2/m = m). (Tarboton 2003
p.1-2) Figure 1 illustrates these
concepts.
 |
| Figure 1. Definitions of concentrated and dispersed contributing
area and specific catchment area (Tarboton 2003). |
LiDAR can place these physical attributes in their topographically
correct position. However, locating point ‘P’ (Figure
1), the perennial initiation point (PIP), becomes a challenge
due to it being dependent on the catchment area which fluctuates
based on geology, climate, precipitation, and other attributes.

1.2 Previous Studies and Background Review
Various hydrological models such as Simulator for Water Resources
in Rural Basins (SWRRB), Environmental Policy Integrated
Climate (EPIC), Groundwater Loading Effects of Agricultural
Management Systems (GLEAMS), TR20, HEC-1, and HEC-2 have
been used in modeling stream networks (Luijten 2000). The
abundance of models demonstrates the importance given to
modeling hydrologic features. During their development time,
typical grid models used 5 – 90 meter DEM’s.
This leads to hydrologic maps not containing the full stream
network, and at times, streams that are topographically incorrect.
Figure 2 demonstrates topographic error in the Washington
DNR stream layer, in yellow, not extending completely up the
channel. Overlaid is a 2m LiDAR-derived hillshade model that
depicts the presumably correct stream courses. The DNR stream
is also shifted by 300 feet to the east of the channel (Schiess
and Tryall, 2002). Such discrepancies are not uncommon. This
example illustrates possible inaccuracies when stream locations
are determined using 7.5-minute topomaps, orthophotos, and
some field verification. This was demonstrated in other projects
as well and usually is recognized by field staff and planning
staff as a critical issue in developing reliable forest operations
designs.
 |
| Figure 2. DNR stream data (yellow
lines) overlying a 2m LiDAR-derived hillshade model
that depicts the presumably correct stream courses.
Note the discrepancies between LiDAR-derived hydrographic
features and 7.5-minute-derived hydro data residing
in the official data layer (Schiess and Tryall, 2002). |

Figure 3 shows the contours generated from a standard 10-m
DEM overlaid on a 2m LiDAR-derived hillshade model with slope
classes from the LiDAR derived DEM. Downhill is toward the
upper right. LiDAR topography provided a realistic and detailed
topography. Photogrammetricly produced contour lines captured
the general shape of the landscape; however, complex features
such as incised streams, draws, abandoned road beds and sharp
ridges were not recognized (Schiess and Krogstad, 2003). The
contour lines also do not follow the stream channel accurately.
|
| Figure 3. A Lidar-hillshade derived
from 2m grids versus the contours, derived from DNR’s
1:4800 photogrammetically derived maps with roads.
Downhill
is toward the upper right. LiDAR topography provided
a realistic and detailed topography. Photogrammetricly
produced contour lines captured the general shape of
the landscape. However, those contour lines miss the
topographically and regulatory important stream depression
as indicated by the LiDAR hillshade model (Schiess and
Krogstad, 2003). |
The advantage of LiDAR digital data over conventional photogrammetry
is improved mapping in obscured areas. A LiDAR bare ground
surface model containing only elevations can be obtained after
filtering out the trees and buildings in the dataset. The digital
data then can be used in a variety of ways including: digital
terrain model for use in generating contours, 3D terrain views,
fault locations, steep slopes, critical areas, and stream and
drainage basin delineation (North Carolina 2003).

One attempt to use LiDAR data to generate stream channels
at the College of Forest Resources, University of Washington
was on the South Tyee Planning Study in 2002 (Schiess and Tryall,
2002). The stream layer was produced by the “flowaccumulation” command
in GRID and a uniform buffer was added (Figure
4). The stream
layer could be adjusted by changing the contributing cells
to the stream, which made it possible to duplicate conditions
observed in the field. The contributing cell size was adjusted
to a slightly higher level in order to include areas that may
not have contained water at the time. It should be noted that
while the GIS method of “flowaccumulation” puts
streams in their expected channels, it can both over- and underestimate
the stream lengths (Schiess and Tryall, 2002). This is because
a uniform catchment size is defined on all stream basins when
catchment size could vary from basin to basin which causes
inaccuracy.
|
|
| Figure 4. Stream
layer produced from flow accumulation model in ArcGIS
with
75-ft buffer using LiDAR at left compared to DNR
hydro layer with buffered widths scaled based on stream
type
(Schiess and Tryall, 2002). |
There were many discrepancies in comparing the LiDAR “flowaccumulation” streams
with a DNR-Hydro layer, which is based partly on a 7.5 minute
topographic generated streams in the South Tyee Planning Study
(Schiess and Tryall, 2002). The 7.5 minute streams were buffered
with widths based on stream type and the LiDAR streams were
buffered at an average of 23m. Table 1 shows that there is
a 182-ha difference between the two buffer representations.
No thorough field verification was conducted, however.
| Table 1. Area Covered by Buffers in South Tyee (Schiess
and Tryall, 2002). |
 |
With better field reconnaissance and appropriate buffer widths
a more accurate stream layer could be produced. However, the
LiDAR stream data provided a better input for the preliminary
planning process than the 7.5 minute stream data (Schiess and
Tryall, 2002).

1.3 Current Stream Data
The current stream data was created by the DNR and is accessible
through their online database. The stream data represents
an integrated network coverage (polygons and lines) that
contains data on water bodies (open waters, lakes, etc.)
and watercourses (rivers, streams, canals, etc.) (Hydro metadata).
The data was produced using orthographic photos from 1974,
topographic maps, and field observations. On March 1, 2005
a new Water Type Attribution was completed. The primary purpose
of the DNR hydro layer was to aid in the application of timber
harvest and other forest practices regulations and activities
by the Washington Department of Natural Resources (DNR).
Other uses include cartography and analysis where hydrographic
data is required.
The Water Type process occurred during
a time of significant and rapid improvement in technical
information and software
tools. As a result of the extensive fish surveys being
performed, abundant field survey information was available
for many areas
of the state. Advances in GIS technology provided opportunities
to evaluate resource protection and economic performance
of alternative water typing systems across large geographic
areas.
Digital Elevation Models (DEM) produced by the U. S. Geologic
Survey became widely available, allowing for consistent
and reliable characterization of the physical landscape.
For the
first time since the implementation of forest practice
regulations governing fish-bearing water bodies in the 1970s,
the tools
and data were available to develop and assess a data-driven
classification system for use across the entire state. (Conrad
et al., 2003 p.4)
The physical attributes for the Water Typing model were based
on a USGS 10-DEM. Using this DEM, physical barriers such as
waterfalls and downstream gradient could be overlooked due
to the low resolution. Furthermore stream channels predicted
using aerial photos under and over estimate stream locations
due to visibility. At times, the channels were topographically
off from the actual location of those channels (Schiess and
Tryall, 2002).
The current DNR hydro layer has two coding systems, type code
and fish/non-fish code. Type code is describes as:
-
type 1, 2, and 3 --------- Fish bearing waters
-
type 4 and 5------------- Non-fish bearing
waters
-
type 9-------------------- Untyped, unknown
Types 1-4 are considered perennial and type
5 and 9 are seasonal. The second code either describes streams
as
fish-bearing or non-fish bearing waters. This code was derived from
the Cooperative
Monitoring, Evaluation, and Research
group (CMER) using the CMER Model as described in the Method
/ Model Development
section.
The same channel network is used for both
code systems.

1.4 Research Objectives
The goal of this project is to determine if LiDAR would improve
stream network classification. Therefore the following questions
needed to be answered:
-
Does an increase in resolution improve stream channel determination?
-
Can stream types be determined more accurately
using LiDAR datasets?
-
Can a new algorithm be developed for identifying
perennial streams?
To verify that the increased LiDAR resolution improves stream
modeling, different hydrologic models were tested using a 10
meter USGS and several LiDAR DEMs at various resolutions. D8,
D-Infinity, Multiple Flow, and DEMON were the model algorithms
used (refer to section 2.5 Flow Direction
Methods Utilized).
Once the models were used and data was generated from the model,
field verification was carried out to verify the accuracy of
the predicted stream channels.
2. METHODS / MODEL DEVELOPMENT
Flow direction algorithms for locating stream channels were
used on various resolutions and correlated with field data.
This was completed to establish which flow direction technique
worked best with LiDAR data. For stream typing, the Cooperative
Monitoring, Evaluation, and Research group (CMER) from the
Washington State Department of Natural Resources (DNR) has
established a model which predicts which streams are inhabited
by fish and which do not contain fish. This model was compared
to a gradient model approach which used a LiDAR DEM.
Three models needed to be developed in order to decide if
resolution has an effect on stream channel determinations and
if stream types could be determined more accurately by LiDAR.
The first model is the generation of the stream network from
LiDAR DEM. The second is a water-typing model to determine
the end of fish point (EOFP) from the generated stream network
and the third is the perennial initiation point (PIP) model.
2.1 Site Description
The North fork of the Mineral Creek Watershed in the Mt. Tahoma
State Forest is an area of approximately 3600-ha of forested
terrain on steep topography with slopes up to 80% (Figure
5). It is located near Ashford WA, contained within T14N,
R6E and T13N, R6E. This site was chosen because the Forest
Engineering (FE) capstone project was located there and could
provide logistical support as well as utilizing initial findings
in the development of a forest transportation strategy which
was critically dependent on a reliable stream location depiction.
Digital datasets of the existing hydrology, cross drains,
roads, fish barriers, soils, and high resolution digital
elevation models based on LiDAR were obtained from WA DNR.
The LiDAR dataset was flown in February 2003 and processed
by the University of Washington with help from Hans-Erik
Andersen and Matt Walsh (Appendix A). The DEM’s that
were processed from the LiDAR at 2-m grid cell size were
used for forest transportation designs as part of the FE
Capstone projects in 2003 and 2005 (Schiess and Tryall, 2003;
Schiess and Mouton, 2005).

|
|
| Figure 5. The North
fork of the Mineral Creek Watershed in the Mt. Tahoma
State Forest within the orange boundary is an area
of approximately 3600-ha. (60-m contour lines). |
The mean annual rainfall in this area ranges from 2007 to
2210 mm (Daly et al. 2000) with an altitude range of 500 to
1600 m. Forest cover is dominated by Douglas Fir (Pseudotsuga
menziesii) with Western Larch (Larix occidentalis), Red Alder
(Alnus rubra), Big Leaf Maple (Acer macrophyllum), Western
Hemlock (Tsuga heterophylla), White Fir (Abies concolor), and
Black Cottonwood (Populus trichocarpa) throughout. The majority
of the region’s soils belong to the Bellicum, Cattcreek,
and Cotteral soil series (Soil Survey Staff, 1998). The upper
part of the profile has a cindery texture from the pumice and
volcanic ash aerially deposited from Mt. St. Helens. The lower
part of the profile formed in colluvium, alluvium or glacial
till from andesite with a mixture of pumice and volcanic ash.
In general, these soils have low fertility and water-holding
capacity and often occur on unstable slopes. The geology is
categorized by Oligocene-Eocene (OEvba) and Oligocene (Ovc(oh))
defined as basaltic andesite flows and volcaniclastic deposits
or rocks.
2.2 Stream Model
The type of streams that were modeled included all segments
of natural waters within the bankfull widths of defined channels
which are either perennial streams (waters that do not go
dry any time of a year of normal rainfall) or were physically
connected by an above-ground channel system to downstream
waters. In extracting networks from DEM’s, Tarboton
et al. (1991) suggest that the network extraction should
have properties traditionally ascribed to channel networks
and have as high resolution as possible. A LiDAR-generated
DEM provides this high resolution and the physical properties,
such as channel depth and slope, associated with a stream
network.
2.3 Water-Typing Models
Two preexisting logistic regression models were used to identify
potential fish habitat. The CMER Model takes into account
several physical attributes while the Gradient Model focuses
on the gradient of the landscape. LiDAR DEM data was used
to generate the attributes needed to apply these models.
2.3.1 CMER Model
The CMER Model was used to identify potential
fish habitat. Based on previous research, this habitat-based,
water-typing model was developed using logistic regression
analysis and GIS data which incorporated the results of field
surveys (Conrad et al., 2003).

The fish absent | fish present (FAFP) data used to estimate
the logistic regression models were generated from 4,052 end-of-fish
points (EOFP) placed on a Washington Dept. of Natural Resources
(DNR) GIS hydrologic layer. Each EOFP was based on a field
survey which followed specific protocols to identify a location
on the stream that was designated as either last fish or last
fish habitat. Potential EOFP were submitted to DNR for error
checking and initial screening (Conrad et al., 2003). After
approval by DNR, the EOFP was transferred from the DNR hydrologic
layer to a 10m DEM-generated stream point network. An automated
procedure was then used to classify points upstream of the
EOFP as fish absent points and points downstream of the EOFP
as fish present points. There were four physical attributes
associated with each point on the DEM network:
-
Basin size (number of acres in surrounding basin that drain
through a point),
-
Elevation in feet (based on 10-m DEM network),
-
Downstream gradient which is the average
gradient measured over 100-m downstream of the point (calculated
from
10-m DEM network elevation information), and
-
Precipitation in inches (GIS derived estimate
of average annual precipitation at the point
based on Daly et al. [1998]).
These four physical attributes associated
with each EOFP point were the variables available
for the logistic
regression
model
building process.
Equation 1 is the response function where is the estimated
probability of fish presence.
| (1) |
 |
Equation 2 is the linear model where the variables are described
in Table 2 (Conrad et al., 2003).
| (2) |
 =
-7.717073 + (0.020166 * (PRECIP)) + (3.793994 * (Log10(BASIZE))) –
(0.062949 * (DNGRD))
- (0.110926 * (ELEV / 100)) |
The CMER Water-Typing Model was applied to the LiDAR DEM in
the same manner it was applied to the 10m DEM. Downstream
gradient (DNGRD), Elevation (ELEV), and Basin Size (BASIZE)
were determined
by LiDAR using the LiDAR-derived stream network and elevation
model. Table 2 provides the results of the logistic regression
model (Conrad et al., 2003).
| Table 2. Summary of the final logistic regression model
coefficients, standard errors, significance of the coefficients,
and 95% confidence intervals for the exponential of the
coefficients. (Conrad et al., 2003) |
 |

2.3.2 Gradient Model
This model’s objective was to identify
the physical constraints and stream characteristics at the
upstream limits of trout distribution (Latterell et al., 2003).
Logistic regression was used to model the likelihood of trout
presence in a 100-m stream reach as a function of physical
stream attributes using sites described in Latterell et al.
(2003) sites. The regression provided a probabilistic prediction
of trout presence because the dependent variable was binomial
(trout presence or absence). Further, this technique does not
assume normality, equal variances, or a linear response. Equation
(1) from above is the response function used for this model
with as
the linear model, which is
| (3) |
 |
where B1 is the Gradient Coefficient at -0.209 and B0 is the
Model Constant at 2.765. Logistic regression calculates the
probability of success identified as (i.e., trout presence,
0.50)
over the probability of failure (i.e., trout absence, < 0.50).
2.4 PIP Model
The perennial initiation point (PIP) is the point where perennial
flow begins on a Type 4 Water. Type 4 Water means all segments
of natural waters within the bankfull width of defined channels
that are perennial non-fish habitat streams. The model for
PIP was developed in a GIS framework, whereby the measuring
and recording of geomorphic stream characteristics were done
by GIS at grid-center points along a LiDAR digital elevation
model (DEM) generated stream network.
Perennial initiation point standard is defined in WAC 222-16-030(3)
and 222-16-031(4) of the Washington State Register. For western
Washington sites not in any coastal zone, Type 4 waters begin
at a point along the channel where the contributing basin
area is at least 21-ha.
The PIP Model was based on the techniques described in Conrad
et al., (2003) except the logistic regression was used to identifying
where perennial flow begins and where it ends instead of fish
present. Stream head data locations were collected in the field
for 5 sub-basins within a selected site. Points were generated
15 meters upstream and downstream of the stream head in GIS
(Figure 6) for clear perennial definition and the following
physical attributes were associated with the points to determine
which influenced perennial flow:
-
Basin size – Using SAGA (System for
Automated Geoscientific Analyses, a GIS system) (Appendix
F) the algorithms described
in the Stream Model section were utilized.
-
Downstream gradient - Using the 2-m LiDAR
DEM, focalmin was used in ArcMap GIS 9.0 Raster Calculator
using 100 meter
mean. The 2-m DEM was then subtracted by the focalmin
output and divided by 100 meters.
DG = float([2m DEM] – focalmin([2m DEM], circle,
50) / 328 * 100%
50 is 100 meters in mapping units for 2m grid cell size
and 328 is 100 meters in ft.
-
Forest Density - A spatial tree list was
created using LiDAR by Hans-Erik Andersen. The table
in the list was
comprised
of height and diameter of the tree. Crown radius
was then calculated for each tree using:
CR = (H + .223) / 4.4
where CR is crown radius and H is height (Oladi 2001).
A crown cover layer was created
by buffering each point using the size
of the crown radius and converting
the resulting polygon coverage to a grid. Individual
tree crown
density was
determined by
taking an 11-m buffer around
the tree point and dividing the area of the crown within
the buffer by the
area
of the buffer.
-
Slope (calculated from
2m LiDAR DEM network
elevation information
in percent with ArcMap
(%slope = 100
* Tan (  y/  x))),
-
Elevation in feet
(LiDAR bare earth
DEM),
-
Precipitation
in inches (GIS
derived
annual precipitation
at
the point based
on Daly et
al. [2000]),
and
-
Site Class
(Downloaded
from Washington
DNR website)

 |
| Figure 6. Plan view at a stream
channel showing points generated 15 meters upstream and
downstream of the
stream head with physical attributes associated with the
head. This is to produce a binomial linear regression model
identifying perennial and non-perennial parts of a stream
network. |
The points upstream represented non-perennial flow as the points
downstream represented perennial flow. Using binary logistic
regression and setting 0 for non-perennial and 1 for perennial,
the physical attributes associated with each point were used
to develop Equation 1 from above and equation 4.
| (4) |
= b0+b1xi1+b2xi2+...+bpxip |
where
is the estimated
linear equation
xij is the jth predictor for the ith case of the physical attributes
bj is the jth coefficient for the physical attributes
p is the number of predictors.
After the model equation was applied and the values less than 0.5 (non-perennial, < 0.50)
were removed in Arc, regiongroup in ArcTools was applied to find the continuous
parts of the network. The grid was then converted to an .asc file and imported
into SAGA (Appendix F). Channel Network in SAGA was applied and the vector
linear stream network was created.
After applying the model equation in Arc, probability of non-perennial
was adjusted from 0.5 to around 0.97 for a conservative approach.
This was determined by looking at the histogram in the classification
class and moving the class line to the highest possible number
without removing the stream network. Regiongroup in ArcTools
was then applied to find the continuous parts of the network.

2.5 Flow Direction Methods Utilized
Four flow direction methods were utilized for this project. This
includes the D8, D8, Multiple Flow Direction (MFD), and DEMON
algorithms. The D8, MFD, and DEMON algorithms were utilized
because the D8 algorithm has two major restrictions:
(1) flow which originates over a two-dimensional pixel
is treated as a point source (non-dimensional) and is projected
downslope
by a line (one dimensional) (Moore and Grayson, 1991), and
(2) the flow direction in each pixel is restricted to eight
possibilities. (Costa-Cabral and Burges, 1994 p.1)
Spatial processing has a limited number of raster-based procedures.
Collectively, these raster-based procedures implemented in ARC/INFO
utilize the single flow direction (SFD) algorithm (O’Callaghan
and Mark 1984). It calculates flow direction as the steepest
slope direction, which is determined by the Maximum Downward
Gradient (MDG) (Figure 5). This SFD algorithm, also known as
the Direction 8 or D-8, is widely used on DEM data analysis and
GIS software (e.g., the “Flowdirection” function
in ARC/INFO GRID) (Jenson and Domingue 1988). The D-8 raster
procedures form the basis for describing and modeling water flow
through a digital elevation data set. Using the D-8 directional
information associated with each cell, a network of flow from
one cell to the next is represented. Using the flow direction
information, the number of cells that flow into any cell is tracked
and assigned to the cell.
The D8 algorithm, also known as Biflow Direction (BFD),
was proposed by Tarboton (1997). In this algorithm the 3
X 3 cell
window is divided into 8 triangular facets. The slope direction
and magnitude of each facet are compared. The steepest downward
direction is chosen and divided into two directions along
the edges forming that facet (Figure 7). The proportion of
flow
along each edge is inversely proportional to the angle between
the
steepest downward directions and the edge. Therefore at most
two flow directions can be assigned to each cell. The contour
length is defined as the grid cell size (DEM resolution),
and the slope is set to be the largest slope of 8 facets.
(Tarboton
1997) (Pan et al., 2004 p.11)

Multiple Flow Direction (MFD) algorithm is the third method
that was used for determining flow direction.
Quinn et al. (1991) first suggested this algorithm to
improve representation of the convergence or divergence of
flow. Wolock
and McCabe (1995) showed how to implement this algorithm using
ARC/INFO GRID functions. Unlike the SFD and BFD algorithms,
the MFD algorithm, each flow direction is weighted by the downward
elevation gradient (i.e., from the central cell to each of
its
8 neighbors) multiplied by a “contour length” (Figure
7). There are two way so set the contour length: i.e. (HR/2)
and ( (2)HR/4)
(Quinn et al., 1991), or 0.6HR and 0.4HR (Wolock and McCabe
1995), for cardinal and diagonal flow directions,
respectively, where HR is the horizontal resolution, ….
(Pan et al., 2004 p. 2-3)
In DEMON (Digital Elevation MOdel Network) by Costa-Cabral
and Burges (1994), flow is generated at each pixel (source
pixel)
and is routed down a stream tube until the edge of the DEM or
a pit is encountered. The stream tubes are not constrained to
coincide with the edges of cells and can expand and contract
as they traverse divergent and convergent regions of the DEM
surface. The stream tubes are constructed from the points of
intersections of a line drawn in the gradient direction (aspect)
and a grid cell edge (Figure 7). The amount of flow, expressed
as a fraction of the area of the source pixel, entering each
pixel downstream of the source pixel is added to the flow accumulations
value of the pixel. After flow has been generated on all pixels
and its impact on each of the pixels has been added, the final
flow accumulation value is the total upslope area contributing
runoff to each pixel. (Wilson and Gallant, 2000 p.66)
 |
| Figure 7. Schematic of the DEM pixel
aspect computation and flow angle mapping performed by
the D8, MFD, Dinf, and DEMON algorithms. Values on the
left signify elevation. Solid arrows point in the direction
that flow is mapped, and dotted lines correspond with
the degree value above the pixel and indicate the pixel
aspect for DEMON and Dinf. The distinctions between a
block- and edge-centered DEM is illustrated (Endreny
and Wood 2001). |

2.6 Stream Channel Determination by Flow Accumulation
Once it is determined how water flows across a landscape, a flow
accumulation value can be assigned to each cell showing how
many cells are upstream from it. This simulates water as it
accumulates going down hill to a stream channel. A user-determined
accumulation cell threshold value identifies those cells that
have concentrated flow and those cells that do not have concentrated
flow. This threshold value defines the catchment size required
for flow to become a stream channel.
Montgomery and Dietrich (1992) found that landscape dissection
into distinct valleys is limited by a threshold of channelization
that sets a finite scale to the landscape. This threshold determines
the number of sub-basins that exist in the model. A small threshold
results in a large number of small basins whereas a large threshold
results in a small number of large basins. The threshold is equal
to the hillslope length / accumulation that is just shorter than
that necessary to support a channel head (Montgomery and Dietrich
1992). A threshold-based approach is most appropriate for modeling
channel head locations over shorter, geomorphic time scales (e.g.
102-103 years) than modeling valley development
(e.g. 104-106
years) (Montgomery and E. Foufoula-Georgiou 1993).
2.7 Generation of Flow Direction Networks
Many programs were used to implement the different flow direction
models on a LiDAR DEM. SAGA (System for Automated Geoscientific
Analyses) was the main interface used while ArcMap, TauDEM
(Terrain Analysis Using Digital Elevation Models), and TAS
(Terrain Analysis System) were used to verify that SAGA was
performing the flow direction models properly (Appendix
F).
The reason that SAGA was used instead of other programs was
its ability to store grid files in memory. Memory storage allowed
the data to be compressed saving computer memory to permit
more demanding tasks such as computing flow direction algorithms.
The LiDAR DEM had to be broken up into individual sub-basins
for the other programs to use the data. Because of the computational
demand of DEMON, the 2-m LiDAR DEM had to be divided into the
basin specific for the study site for SAGA to utilize the dataset.
2.8 Current Hydro Layer Evaluation
Evaluation of the DNR hydro layer consisted of selecting two
watersheds within the study site and confirming the DNR stream
types correlated with what was out in the field. When an error
in correlation existed, the proper stream type was determined
in the field to identify common problems within the DNR hydro
layer.

2.9 Field Measurements
Field locations were sampled to test the accuracy of the current
DNR hydro layer, various models used with the project, and
evaluate the creation of a new stream model. Table
3 lists
the features collected with Table 4 listing the associated
attributes of those features.
| Table 3. Stream parameters identified and collected in
the field. The information was logged together with GPS coordinates. |
 |
| Table 4. Fish presence or absence, % gradient and fish
barrier type was logged with each stream feature type. |
 |
Field planning was done by using LiDAR streams with the DNR
hydro layer to locate stream features in the field. The above
values were then determined and logged using a Trimble ProXRS
GPS unit. The ranges for width and water depth for each stream
feature were evaluated (Table 4) as well as the possible values
(Table 4) that the features could have associated with it. Fish
presence was assessed only by visual inspection of the stream.
If a stream did not contain much water, contained many fish barriers,
or went underground, it was assumed that no fish would be present.
Field work was done April 20th through May 3rd 2005.

3. RESULTS
3.1 Flow Direction Comparison
The D8, Dinf, MFD, and DEMON predicted stream channel locations
differently. The major difference in stream channel determination
was in hillslope interpretation. Differences between D8 and
DEMON decreased as resolution increased. From visually inspecting
Figure 8, a 1:1 relation between D8 and DEMON at the 2-m resolution
was shown using regression correlation, when a stream is defined
as a 5-ha (13.2 (ln ft2)) basin. The models do not begin to
correlate until 30.4-ha (15.0 (ln ft2)) at the 10-m USGS resolution
from Figure 9. As resolution increased, the spread of the points
in those figures becomes more confined to the lower left corner
indicating the correlation between D8 and DEMON flow direction
models. Table 5 summarizes the relationship
between D8 and DEMON algorithms at various resolutions. No
correlation can
be determined with any combination of the other flow direction
models with respect to increased resolution (Appendix
G). APPENDIX
G provides the plots of catchment area at all resolutions with
the flow direction models used.
 |
| Table 8. Cell plot of entire catchment
area for a 2-m LiDAR DEM at the study site (Natural Log
Values). D8 and DEMON correlate well above a threshold
of approximately 5-ha as shown with the red mark. Below
the 5-ha mark, differences are shown by the scatter. |
 |
| Table 9. Cell plot of entire catchment
area for the 10-m USGS at the study site (Natural Log
Values). D8 and DEMON do correlate although not until
a catchment area of approximately 30-ha is acceded as
shown with the red mark. Below the 30-ha mark, differences
are shown by the scatter. |

| Table
5. Relation between D8 and DEMON algorithms at various
resolutions. As resolution is decreased, the correlation
between D8 and DEMON becomes less. Basin size values
determined by visually inspecting the plot of catchment
area figures. |
 |
Using LiDAR datasets, D8 determines stream networks as well
as DEMON. Endreny and Wood (2003) gave 2D-Lea (a building block
in DEMON) the highest ranking in accuracy in comparison to any
stream model that was used in their study. The data suggested
that increased DEM resolution decreased the need for sophisticated
models, reducing processing times required by complex models
for high-resolution DEM’s. Since D8 is the most commonly
used model and simplest to implement, computational time in computing
stream networks is reduced in comparison to DEMON.
When comparing a LiDAR derived 10-m DEM with a USGS 10-m DEM,
D8 stream channels with a catchment size of about 12-ha and greater
somewhat converge between the two DEM’s (Figure
10). When
catchments are less than 12-ha, no convergence existed. Since
a USGS 10-m DEM contained topographic errors in regard to stream
channel location, streams from the LiDAR and USGS were categorized
as identical if they were less than 90-m apart to decrease error
between the two datasets. This caused differences to decrease
significantly between the two stream networks (Appeddix
H). These
differences occur in Strahler order 1, 2 and 3 streams. The area
in the lower middle of Figure 10 corresponds with areas when
that the 10-m USGS under predicted stream channels in comparison
to the area to the left side of the figure which corresponds
to areas of under prediction of the LiDAR 10-m.
 |
| Table 10. The D8 flow algorithm
applied to the USGS and LiDAR Generated 10-m DEM. Illustrates
that stream channels with a catchment size of about 12-ha
and greater somewhat converge between the two DEM’s
with regards to D8. When catchments are less than 12-ha,
differences in stream channel location are shown by the
scatter. |

3.2 Resolution Effects on Flow Direction
As the DEM resolution increased, D8 model sensitivity also increased.
At the 2-m resolution, a road crossing a stream is seen as
a dam therefore routing the stream onto the road (Figure
11).
The road influence alters stream location and extent. To correct
this problem, known culvert locations, stream or ditch culverts
at the study site were used to make the stream continue under
the road. The LiDAR DEM was lowered in elevation at the culvert
locations to cause the stream channels to flow to the culverts
and away from the road. Culvert data causes the streams to
flow to the main channel thereby minimizing road effects (Figure
12) (Schiess and Tyrall, 2003).
Decreasing the LiDAR-DEM resolution to 6-m removed the road
effect and placed streams in a more realistic location than the
2-m
uncorrected. At 6-m resolution, the stream models could not
identify roads or the ditches associated with the roads. As the
LiDAR-DEM
resolution decreased, road influence decreased. Stream channels,
for the most part, followed the corrected 2-m stream network
(Figure 13). The advantage of the 6-m LiDAR-DEM was that it
provided a significantly improved stream network compared to
the 10-m
USGS DEM and removed the need for culvert data.
 |
| Figure 11. Streams
generated from the 2-m LiDAR-DEM, in red, without using
culvert
correction.
Stream culverts are circled, ditch culverts are triangles.
At the 2-m resolution, the models defined some roads
as stream channels bypassing the stream culverts (arrows). |
 |
| Figure 12. Streams
generated from the 2-m LiDAR-DEM using culvert locations.
Stream culverts are circled, ditch culverts are triangles.
Culvert data causes the streams to flow downslope of
the culvert allowing the stream to travel to the main
channel more accurately. |
 |
| Figure 13. At 6-m resolution,
the stream models did not route streams along roads and
ditches. Removing the road effect placed streams in a
reasonable location. |

3.3 Assessing the Current Hydro Layer
Of the streams that the WA DNR identified as Type 9 (section 1.3),
72% were observed as not containing water. Half of those did
not even contain an identifiable stream channel. The other half
could be considered seasonal even though water erosion was not
present. The remaining 28% that contained water also contained
a perennial initiation point.
Very few of the streams typed as 5 were dry and most were perennial.
Figure 14 illustrates field verified perennial streams identified
using 6-m LiDAR DEM versus what the DNR considers perennial. Not
all streams were visited due to stream head inaccessibility. There
is a 530% increase in perennial stream length going from the DNR
hydro layer perennial steams to the field verified perennial streams
(Table 6). If a uniform buffer of 30 meters, a standard DNR regulation
estimate, was placed around the stream channels, there would be
a 350% increase in buffered area.
 |
| Figure 14. Field verified
perennial streams using LiDAR in green vs. what the DNR
considers perennial in blue. |
| Table
6. Differences in perennial stream length between DNR hydro
layer and the LiDAR stream network derived from 6-m LiDAR
DEM. |
 |
| *Uniform 30-m buffer for both datasets for Perennial
flow |
3.4 Determining Perennial Streams
Given the soils geology and topography of the Tahoma State Forest,
perennial flow began when ground water surfaced to form a stream
head (Figure 15). Almost 90% of the stream heads located in the
field fit this description interpreted as a spring (Figure
16).

 |
| Figure 15. Stream head
defined by the landscape. Perennial flow begins when ground
water surfaced to form a stream head |
 |
| Figure 16. Spring identified
as a stream head in the field.what the DNR considers perennial
in blue. |
In the field, 61 stream heads were located within the Mineral
Creek, North Fork watershed. Table 7 lists the distribution on
the stream heads and Figure 17 displays the locations of the heads.
Using the method described in the PIP Model section, 53 heads were
selected at random within the study site to be used to create a
model to predict perennial initiation points (PIP).
| Table
7. Sub-Basins used in perennial head identification with
the
number of stream heads visited in the field. |
 |

 |
| Figure 17. Stream heads
in green within the study site. Stream channel generated
from the 6-m LiDAR-DEM. |
The final Linear Regression model for PIP used fewer variables
than expected. The final model selected Basin Size using D8, Percent
Slope, and Precipitation. Downstream gradient, forest density,
elevation, and site class could not be used to create the equation
for determining the probability of stream head locations based
on a 0.05 significance level. Table 8 summarizes the variables
uses for the regression. The Hosmer-Lemeshow chi-square statistic
for this model was 10.262 and the -2 Log likelihood statistic was
80.130. Self-classification accuracies for this model were 77.4%
for perennial flow and 88.7% for non-perennial flow. APPENDIX
I provides further statistics regarding regression.
| Table 8. Summary of the final logistic regression
model. |
Coefficients |
Estimate |
Standard Error |
Signifi-cance |
Exp(B) |
95.0% C.I. for Exp(B) |
Lower |
Upper |
| Log10(Basin Size) |
7.235 |
1.425 |
0 |
1386.737 |
84.879 |
22656.314 |
| Precipitation |
0.477 |
0.184 |
0.01 |
1.612 |
1.123 |
2.313 |
| % Slope |
0.096 |
0.04 |
0.016 |
1.101 |
1.018 |
1.191 |
| Constant |
-45.172 |
16.05 |
0.005 |
0 |
|
|
Using a model based on basin size alone for predicting perennial
stream channels would be less accurate than the above model. The
Hosmer-Lemeshow chi-square statistic for basin size model was 8.864
and the -2 Log likelihood statistic was 91.840. Self-classification
accuracies for the basin size model were 77.4% for perennial flow
and 84.9% for non-perennial flow. Overall, the average basin size
for perennial flow for this model is 1.28-ha (3.16 acres).
Both models can over estimate the extent of perennial stream channels
by placing flow upstream of the PIP. Using the conservative approach
described in the PIP Model section it has the potential to under
predict perennial flow. Using average basin size determined from
the field data, the average value is 2.2-ha (5.44 acres). This
average over and under predicts perennial flow. Since the Washington
State Register defines contributing basin area as at least 21-ha
(52 acres), all models and approaches would significantly correct
WAC estimations.
The model in Table 8 was run at 4 different resolutions, 2-m,
6-m, 10-m LiDAR and a 10-m USGS DEM. Figure 18 illustrates the
change in distance between modeled stream head location and field-verified
stream head location for different DEM resolutions. This indicates
that at all LiDAR resolutions, the error is relatively the same.
The 10-m USGS DEM average distance and spread are higher than the
LiDAR. This confirms that LiDAR improves upon modeling stream heads
more accurately than a 10-m USGS DEM. The reasoning for high distances
in the figure is due to the model not predicting a stream where
the field verified stream head was located.

 |
| Figure 18. The distance
error between modeled stream head location and field-verified
stream head location at a given resolution. This indicates
that at all LiDAR resolutions, the error is relatively
the same. The 10-m USGS DEM average distance and spread
are significantly higher than the LiDAR. |
The PIP Model was tested on the various flow direction techniques
listed in the “Flow Direction Methods Utilized” section
to test which flow direction algorithm worked best in locating
perennial flow. Because of the differences in the MFD and Dinf
from D8, a separate bilinear regression model was created but none
of the variables were significant based on a 0.05 significance
level. The regression model in Table 8 was then used on the various
algorithms on a 6-m LiDAR DEM to see the errors in predicted stream
head locations. DEMON and D8 stream heads correlated in the difference
in distance from the field-verified stream heads. Dinf and MFD
increased in the difference in distance from field stream heads
when compared to D8 (Figure 19). Finding a way to develop a bilinear
regression model for Dinf and MFD would reduce the data error illustrated
below.
 |
| Figure 19. The distance
error between field-verified stream heads and various flow
direction modeled streams. DEMON and D8 correlated in error
while Dinf and MFD significantly increased in error. |

3.5 Determining Fish Stream Habitat
The CMER Model and Gradient Model estimated fish extent differently.
CMER Model used basin area, downstream gradient, elevation, and
precipitation, while the Gradient Model uses only downstream
gradient. With field verification, the Gradient Model located
fish barriers providing accurate fish habitat maps. The CMER
Model tended to place potential fish waters well upstream of
waterfalls and culvert barriers. Overall, the Gradient Model
predicted fish extent closer to the main channel than the CMER
method.
Figure 20 displays a longitudinal profile of a selected creek
generated by a LiDAR DEM. The red zones indicate field verified
waterfalls and culvert/road locations that the Gradient Model identified.
These waterfalls can range from 1 to 6+ meters tall. If trout were
able to pass these barriers, the CMER Model would be correct in
its estimation. Figure 21 shows the predicted fish habitat estimated
by the Gradient Model. The CMER Model and DNR Hydro layer are within
the predicted fish habitat area but overlook small, but critical
segments that act as fish barri |